Bits&Bio Log: 5–17 to 5–19
My goal before the end of the quarter is to work on some mini-project where I can use some of my new knowledge. Given my cs/ai background, I through modeling biological systems would be a fun thing to work on. My laptop totally died though, so I am still figuring out how I can get some coding done, perhaps on my family’s decade-old iPad, or on my brother’s school-provided chromebook after school ends. I’m going to link the papers I’ve been spending the last couple days reading, as well as a drive link to a pdf of my notes going up to yesterday. I highly recommend reading these articles, super interesting.
Generating and designing DNA with deep generative models
Simultaneous deep generative modeling and clustering of single cell genomic data
GenRate: A Generative Model That Finds and Scores New Genes and Exons in Genomic Microarray Data
Generative Models for Synthetic Biology
Colloidal hydrodynamics of biological cells: A frontier spanning two fields
An information-theoretic model of engineered cell–cell communication
Feedback GAN (FBGAN) for DNA: a Novel Feedback-Loop Architecture for Optimizing Protein Functions
